Sriram Subramaniam

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Prospective Graduate Students / Postdocs

This faculty member is currently not actively recruiting graduate students or Postdoctoral Fellows, but might consider co-supervision together with another faculty member.

Professor

Research Interests

Structural Biology
cryo-electron microscopy
drug discovery
Cryo-electron tomography
Antibody design
drug discovery
Protein therapeutics
COVID-19 therapeutic design
Infectious disease
Artificial Intelligence
Machine Learning

Relevant Thesis-Based Degree Programs

Affiliations to Research Centres, Institutes & Clusters

Research Options

I am interested in and conduct interdisciplinary research.
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Research Methodology

electron microscopes operating at cryogenic temperatures

News Releases

This list shows a selection of news releases by ÑÇÖÞÌìÌà Media Relations over the last 5 years.
  • (17 Sep 2020)

Publications

  • (2024)
    Current Opinion in Cell Biology, 86
  • (2024)
    Nature Communications, 15 (1)
  • (2024)
    Nature Structural and Molecular Biology, 31 (3), 424-435
  • (2024)
    IUCrJ, 11 (Pt 2), 140-151
  • (2024)
    Transplantation, 108 (4), E49-E62
  • (2024)
    Nature Methods, 21 (1), 18-19
  • (2023)
    Structure, 31 (7), 790-800.e4
  • (2023)
    Proceedings of the National Academy of Sciences of the United States of America, 120 (37)
  • (2023)
    Biophysical Reviews, 15 (1), 89-91
  • (2023)
    Cell Reports, 42 (1)
  • (2022)
    Nature Methods, 19 (1), 20-23
  • (2022)
    IUCrJ, 9, 98-103
  • (2022)
    IUCrJ, 9 (6), 713-714
  • (2022)
    Encyclopedia of Cell Biology: Volume 1-6, Second Edition, 2, 51-60
  • (2022)
    Chemical Reviews, 122 (17), 13881-13882
  • (2022)
    iScience, 25 (8)
  • (2022)
    Science, 375 (6582), 760-764
  • (2022)
    Nature Communications, 13 (1)
  • (2022)
    Nature Communications, 13 (1)
  • (2022)
    Nature Chemical Biology, 18 (9), 963-971
  • (2022)
    Chemical Reviews, 122 (17), 14066-14084
  • (2021)
    eLife, 10
  • (2021)
    Journal of Biological Chemistry, 297 (4)
  • (2021)
    PLoS Biology, 19 (4)
  • (2021)
    Scientific Reports, 11 (1)
  • (2021)
    eLife, 10, 1-24
  • (2021)
    Current Opinion in Structural Biology, 71, 223-231
  • (2021)
    Cell Reports, 37 (12)
  • (2020)
    IUCrJ, 7, 639-643
  • (2020)
    Journal of Biological Chemistry, 295 (4), 1105-1119
  • (2020)
    IUCrJ, 7, 575-576
  • (2020)
    Microscopy and Microanalysis
  • (2020)
    Microscopy and Microanalysis
  • (2020)
    Cell, 183 (2), 429-441.e16
  • (2020)
    Proceedings of the National Academy of Sciences of the United States of America, 117 (14), 8032-8043
  • (2020)
    IUCrJ, 7, 453-461
  • (2020)
    Cancer Cell, 38 (6), 753-756
  • (2019)
    Cell Reports, 27 (2), 387-399.e7
  • (2019)
    MRS Bulletin, 44 (12), 929-934
  • (2019)
    Science, 366 (6461), 109-115
  • (2019)
    Nature Structural and Molecular Biology, 26 (8), 679-685
  • (2019)
    IEEE Transactions on Visualization and Computer Graphics, 25 (2), 1378-1391
  • (2019)
    Annual Review of Biomedical Engineering, 21, 395-415
  • (2019)
    Journal of Structural Biology, 207 (1), 1-11
  • (2019)
    Nucleic Acids Research, 47 (17), 9400-9409
  • (2018)
    Structure, 26 (6), 848-856.e3
  • (2018)
    Nature, 558 (7711), 553-558
  • (2018)
    Nature, 561 (7724), E44
  • (2018)
    Cell Reports, 23 (9), 2832
  • (2018)
    Current Opinion in Microbiology, 43, 199-207
  • (2018)
    eLife, 7
  • (2018)
    Science, 359 (6373), 339-343
  • (2017)
    Nature Microbiology, 2 (10), 1415-1424
  • (2017)
    Cell, 171 (2), 414-426.e12
  • (2017)
    Current Opinion in Structural Biology, 46, 71-78
  • (2017)
    eLife, 6
  • (2017)
    Cell Reports, 19 (3), 487-496
  • (2016)
    Science, 351 (6275), 871-875
  • (2016)
    Cell, 165 (7), 1698-1707
  • (2016)
    mBio, 7 (2)
  • (2016)
    Molecular Pharmacology, 90 (1), 35-41
  • (2016)
    Proceedings of the National Academy of Sciences of the United States of America, 113 (32), 8903-8905
  • (2016)
    Cell, 164 (4), 747-756
  • (2016)
    IUCrJ, 3, 3-7
  • (2016)
    Encyclopedia of Cell Biology, 2, 44-50
  • (2016)
    Journal of Virology, 90 (17), 7618-7627
  • (2016)
    Current Opinion in Structural Biology, 41, 194-202
  • (2016)
    Scientific Reports, 6
  • (2016)
    Nature, 537 (7621), 567-571
  • (2016)
    Nucleic Acids Research, 44 (7), 3420-3431
  • (2016)
    Nature Methods, 13 (8), 607-608
  • (2016)
    Molecular Pharmacology, 89 (6), 645-651
  • (2015)
    Science, 348 (6239), 1147-1151
  • (2015)
    Nature Communications, 6
  • (2015)
    Nature Communications, 6
  • (2015)
    Nature Methods, 12 (11), 1021-1031
  • (2015)
    Retrovirology, 12 (1)
  • (2015)
    Nature Communications, 6
  • (2015)
    Nature, 523 (7562), 617-620
  • (2014)
    Nature Structural and Molecular Biology, 21 (10), 841-845
  • (2014)
    Microscopy and Microanalysis, 20 (3), 774-775
  • (2014)
    Journal of Structural Biology, 185 (3), 278-284
  • (2014)
    Scientific Reports, 4
  • (2014)
    Advances in Imaging and Electron Physics, 185, 113-137
  • (2014)
    Journal of Virology, 88 (18), 10958-10962
  • (2014)
    Nature, 514 (7522), 328-334
  • (2014)
    Proceedings of the National Academy of Sciences of the United States of America, 111 (32), 11709-11714
  • (2014)
    Journal of Virology, 88 (18), 10327-10339
  • (2014)
    Annual Review of Virology, 1 (1), 453-473
  • (2013)
    Journal of Structural Biology, 181 (2), 116-127
  • (2013)
    Trends in Microbiology, 21 (8), 397-404
  • (2013)
    PLoS ONE, 8 (11)
  • (2013)
    FEBS Journal, 280 (1), 28-45
  • (2013)
    PLoS ONE, 8 (11)
  • (2013)
    Proceedings of the National Academy of Sciences of the United States of America, 110 (15), 5921-5926
  • (2013)
    Current Opinion in Structural Biology, 23 (2), 268-276
  • (2013)
    Journal of Virology, 87 (12), 7191-7196
  • (2013)
    Proceedings of the National Academy of Sciences of the United States of America, 110 (2), 513-518
  • (2013)
    Nature Structural and Molecular Biology, 20 (12), 1352-1357
  • (2013)
    Proceedings of the National Academy of Sciences of the United States of America, 110 (12), 4592-4597
  • (2013)
    Proceedings of the National Academy of Sciences of the United States of America, 110 (45)
  • (2013)
    Journal of Structural Biology, 183 (3), 429-440
  • (2012)
    Journal of Structural Biology, 178 (2), 98-107
  • (2012)
    Journal of Structural Biology, 178 (2), 165-176
  • (2012)
    Nature Structural and Molecular Biology, 19 (12), 1203-1207
  • (2012)
    Structure, 20 (12), 2003-2013
  • (2012)
    IEEE Transactions on Medical Imaging, 31 (12), 2241-2252
  • (2012)
    PLoS Pathogens, 8 (7), 37
  • (2012)
    Resonance, 17 (12), 1157-1164
  • (2012)
    IEEE Computer Graphics and Applications, 32 (5), 39-49
  • (2011)
    Molecular Microbiology, 79 (3), 677-685
  • (2011)
    Analytical Chemistry, 83 (4), 1207-1213
  • (2011)
    Journal of Structural Biology, 176 (3), 268-278
  • (2011)
    Journal of Visualized Experiments (58)
  • (2011)
    Blood, 118 (18), 4841-4852
  • (2011)
    EMBO Journal, 30 (9), 1719-1729
  • (2011)
    Journal of Bacteriology, 193 (6), 1341-1350
  • (2011)
    Proceedings of the National Academy of Sciences of the United States of America, 108 (24), 9798-9803
  • (2011)
    Journal of Virology, 85 (23), 12114-12123
  • (2011)
    Proceedings of the National Academy of Sciences of the United States of America, 108 (28), 11440-11445
  • (2010)
    Proceedings of the National Academy of Sciences of the United States of America, 107 (30), 13336-13341
  • (2010)
    FEMS Microbiology Letters, 313 (2), 89-95
  • (2010)
    Journal of Structural Biology, 171 (2), 125-132
  • (2010)
    PLoS Pathogens, 6 (12)
  • (2009)
    Journal of Structural Biology, 166 (3), 316-328
  • (2009)
    Journal of Structural Biology, 166 (1), 1-7
  • (2009)
    Pattern Recognition, 42 (6), 1067-1079
  • (2009)
    Nature Reviews Microbiology, 7 (9), 666-675
  • (2009)
    PLoS Pathogens, 5 (9)
  • (2009)
    Current Opinion in Structural Biology, 19 (4), 402-407
  • (2009)
    PLoS ONE, 4 (6)
  • (2009)
    PLoS ONE, 4 (7)
  • (2009)
    Current Opinion in Structural Biology, 19 (4), 433-439
  • (2008)
    Microscopy and Microanalysis, 14 (SUPPL. 2), 972-973
  • (2008)
    Journal of Bacteriology, 190 (20), 6805-6810
  • (2008)
    Journal of Structural Biology, 162 (3), 436-450
  • (2008)
    Nanomedicine, 3 (1), 125-131
  • (2008)
    Journal of Structural Biology, 164 (1), 7-17
  • (2008)
    Structure, 16 (1), 93-103
  • Molecular Architecture of Native HIV-1 gp 120 Trimers (2008)
    Chemtracts, 21 (6), 227-228
  • (2008)
    Nature, 455 (7209), 109-113
  • (2008)
    Proceedings of the National Academy of Sciences of the United States of America, 105 (43), 16555-16560
  • (2008)
    Molecular and Cellular Proteomics, 7 (2), 442-447
  • (2008)
    Journal of Bacteriology, 190 (7), 2588-2596
  • (2007)
    Journal of Structural Biology, 158 (3), 318-326
  • (2007)
    Journal of Bacteriology, 189 (20), 7503-7506
  • (2007)
    2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings, 244-247
  • (2007)
    Journal of Biological Chemistry, 282 (38), 27754-27759
  • (2007)
    2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings, 233-235
  • (2007)
    Proceedings of the National Academy of Sciences of the United States of America, 104 (10), 3777-3781
  • (2007)
    Methods in Cell Biology, 2007 (79), 373-384
  • (2007)
    PLoS Pathogens, 3 (5), 0571-0581
  • (2007)
    Current Opinion in Structural Biology, 17 (5), 596-602
  • (2007)
    2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings, 304-307
  • (2007)
    ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings, 1
  • (2007)
    2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings, 217-220
  • (2006)
    Microscopy and Microanalysis, 12 (SUPPL. 2), 1100-1101
  • (2006)
    Microscopy and Microanalysis, 12 (SUPPL. 2), 526-527
  • (2006)
    2nd ASM-IEEE EMBS Conference on Bio-, Micro- and Nanosystems, 37
  • (2006)
    Journal of Biological Chemistry, 281 (7), 4364-4370
  • (2006)
    Journal of Structural Biology, 155 (1), 63-73
  • (2006)
    Microscopy and Microanalysis, 12 (SUPPL. 2), 26-27
  • (2006)
    PLoS Pathogens, 2 (8), 0727-0730
  • (2005)
    IEEE Transactions on Image Processing, 14 (9), 1314-1323
  • (2005)
    Current Opinion in Microbiology, 8 (3), 316-322
  • (2005)
    Journal of Structural Biology, 150 (2), 144-153
  • A new approach for 3D segmentation of cellular tomograms obtained using three-dimensional electron microscopy (2004)
    2004 2nd IEEE International Symposium on Biomedical Imaging: Macro to Nano, 1, 5-8
  • A template-propagation method for segmentation of filamentous structures in electron tomograms (2004)
    2004 2nd IEEE International Symposium on Biomedical Imaging: Macro to Nano, 1, 1-4
  • (2004)
    Journal of Microscopy, 216 (1), 76-83
  • (2004)
    Microscopy and Microanalysis, 10 (SUPPL. 2), 1124-1125
  • (2004)
    Biophysical Journal, 87 (5), 3600-3607
  • (2004)
    Journal of Bacteriology, 186 (15), 5052-5061
  • (2004)
    Annual Review of Biophysics and Biomolecular Structure, 33, 141-155
  • (2003)
    Microscopy and Microanalysis, 9 (SUPPL. 2), 1168-1169
  • (2003)
    Journal of Structural Biology, 141 (1), 63-76
  • (2003)
    Journal of Structural Biology, 143 (2), 135-144
  • (2003)
    Journal of Bacteriology, 185 (12), 3636-3643
  • (2003)
    Journal of Structural Biology, 144 (3), 320-326
  • (2003)
    FEBS Letters, 545 (1), 2-8
  • (2003)
    Journal of Bacteriology, 185 (5), 1712-1718
  • (2002)
    Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 360 (1794), 859-874
  • (2002)
    EMBO Journal, 21 (21), 5587-5598
  • (2002)
    Microscopy and Microanalysis, 8 (SUPPL. 2), 214-215
  • (2002)
    Journal of Molecular Biology, 319 (2), 555-565
  • (2002)
    Nature Structural Biology, 9 (8), 597-600
  • (2001)
    Journal of Structural Biology, 135 (3), 251-261
  • (2001)
    EMBO Journal, 20 (16), 4408-4413
  • (2000)
    Quarterly Reviews of Biophysics, 33 (1), 1-27
  • (2000)
    Biochimica et Biophysica Acta - Bioenergetics, 1460 (1), 157-165
  • (2000)
    Molecular Membrane Biology, 17 (3), 165-174
  • (1999)
    Ultramicroscopy, 75 (4), 235-250
  • (1999)
    Journal of Structural Biology, 128 (1), 19-25
  • (1999)
    Journal of Molecular Biology, 287 (1), 145-161
  • (1999)
    Current Opinion in Structural Biology, 9 (4), 462-468
  • (1997)
    Proceedings of the National Academy of Sciences of the United States of America, 94 (5), 1767-1772
  • Evidence for a long-lived 13-cis-containing intermediate in the photocycle of the Leu 93 → Ala bacteriorhodopsin mutant (1997)
    Journal of Physical Chemistry B, 101 (29)
  • (1997)
    Journal of Physical Chemistry B, 101 (29), 5619-5621
  • (1997)
    Journal of Bioenergetics and Biomembranes, 29 (1), 55-59
  • (1997)
    Proceedings of the National Academy of Sciences of the United States of America, 94 (10), 4966-4971
  • (1997)
    Proceedings of the National Academy of Sciences of the United States of America, 94 (10), 5028-5033
  • Structural changes underlying proton pumping by Bacteriorhodopsin (1997)
    FASEB Journal, 11 (9)
  • (1997)
    Biochemistry, 36 (8), 2188-2196
  • (1996)
    Biochemistry, 35 (6), 1848-1855
  • (1996)
    Biophysical Journal, 70 (5), 2366-2372
  • (1995)
    Proceedings of the National Academy of Sciences of the United States of America, 92 (24), 11120-11124
  • (1994)
    Science, 266 (5189), 1369-1373
  • Electron diffraction analysis of structural changes in the photocycle of bacteriorhodopsin (1993)
    EMBO Journal, 12 (1), 1-8
  • Hydrophobic amino acids in the retinal-binding pocket of bacteriorhodopsin (1993)
    Journal of Biological Chemistry, 268 (27), 20305-20311
  • Aspartic acid 85 in bacteriorhodopsin functions both as proton acceptor and negative counterion to the schiff base (1992)
    Journal of Biological Chemistry, 267 (36), 25730-25733
  • Effect of introducing different carboxylate-containing side chains at position 85 on chromophore formation and proton transport in bacteriorhodopsin (1992)
    Journal of Biological Chemistry, 267 (36), 25734-25738
  • (1991)
    Proceedings of the National Academy of Sciences of the United States of America, 88 (15), 6873-6877
  • (1991)
    Proceedings of the National Academy of Sciences of the United States of America, 88 (6), 2583-2587
  • (1990)
    Proceedings of the National Academy of Sciences of the United States of America, 87 (3), 1013-1017
  • Ultraviolet-visible transient spectroscopy of bacteriorhodopsin mutants: Evidence for two forms of tyrosine-185 → phenylalanine (1990)
    Journal of Biological Chemistry, 265 (28), 16978-16984
  • (1989)
    Proceedings of the National Academy of Sciences of the United States of America, 86 (2), 529-533
  • (1987)
    Journal of Physical Chemistry, 91 (7), 1715-1718
  • (1985)
    Journal of Physical Chemistry, 89 (17), 3592-3595
  • (1985)
    Science, 227 (4685), 415-417

  • Proceedings of the National Academy of Sciences of the United States of America, 83
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